BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B04LP1|AL428845
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1715 0.0
3x_Contig1560 339 4e-93
>3x_Contig1783
Length = 22123
Score = 1715 bits (864), Expect = 0.0
Identities = 875/880 (99%)
Strand = Plus / Plus
Query: 1 gatcagagctttggcactcaaagaaggttataacttagaaggtgataaatcaccttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 gatcagagctttggcactcaaagaaggttataacttagaaggtgataaatcaccttcaag 1335
Query: 61 taaaccttattttatgtcatggccaaaggaaatcgatgtaaatcatcccaatttcgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 taaaccttattttatgtcatggccaaaggaaatcgatgtaaatcatcccaatttcgcctt 1395
Query: 121 cttcacaaaactacagtttcaatatgataagagtttagaaacaattcttaacagttgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 cttcacaaaactacagtttcaatatgataagagtttagaaacaattcttaacagttgtta 1455
Query: 181 cttacaagaattgcarctggaccctactcgcattattgaaactctgcaacagcatttcaa 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 cttacaagaattgcagctggaccctactcgcattattgaaactctgcaacagcatttcaa 1515
Query: 241 caattcaattctccgatatgcagatatagaaaacatttctgacgtcaaagatgagtctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1516 caattcaattctccgatatgcagatatagaaaacatttctgacgtcaaagatgagtctcc 1575
Query: 301 catgtcattcgacacagagcacgagtgttctgatacctcagaagatatttctgataaatc 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1576 catgtcattcgacacagagcacgagtgtactgatacctcagaagatatttctgataaatc 1635
Query: 361 agaaatctcttcaacaaattcagataatccaattcaaaattgctacccaacatataaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1636 agaaatctcttcaacaaattcagataatccaattcaaaattgctacccaacatataaaag 1695
Query: 421 atccttcatcaagcatgaatccagaggaatactggaaaagatcttcaaagttaaacaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1696 atccttcatcaagcatgaatccagaggaatactggaaaagatcttcaaagttaaacaatg 1755
Query: 481 tcctaatacctctgagcgattatacatcgctcagaaacttgatttgacaccatctcaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1756 tcctaatacctctgagcgattatacatcgctcagaaacttgatttgacaccatctcaagt 1815
Query: 541 taggatatggtttactaacaagagaatgagagctaaaaaacatactactggtaaaggaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1816 taggatatggtttactaacaagagaatgagagctaaaaaacatactactggtaaaggaac 1875
Query: 601 taaacgtaaatcaaagaaatacccgagctaaaatagctcgggtctatttgataattagac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 taaacgtaaatcaaagaaatacccgagctaaaatagctcgggtctatttgataattagac 1935
Query: 661 aatatacagtgctaatttctacctatacaactttcttatacttcatcactatcaccatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 aatatacagtgctaatttctacctatacaactttcttatacttcatcactatcaccatat 1995
Query: 721 ctgtaactatattgtctaatttcacccaacctcttaagcttttcctggaacgcaatgttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 ctgtaactatattgtctaatttcacccaacctcttaagcttttcctggaacgcaatgttg 2055
Query: 781 gcgtttatcacggaatcggtctgctttgccgaggataagcatcgcaagaagtcttctgct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 gcgtttatcacggaatcggtctgctttgccgaggataagcatcgcaagaagtcttctgct 2115
Query: 841 atggtctgcatctcctgtgggcagcggasaggtagtgaga 880
|||||||||||||||||||||||||||| |||||||||
Sbjct: 2116 atggtctgcatctcctgtgggcagcggagcagtagtgaga 2155
>3x_Contig1560
Length = 9209
Score = 339 bits (171), Expect = 4e-93
Identities = 178/181 (98%)
Strand = Plus / Plus
Query: 700 acttcatcactatcaccatatctgtaactatattgtctaatttcacccaacctcttaagc 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8316 acttcatcactatcaccatatctgtaactatattgtctaatttcacccaacctcttaagc 8375
Query: 760 ttttcctggaacgcaatgttggcgtttatcacggaatcggtctgctttgccgaggataag 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8376 ttttcctggaacgcaatgttggcgtttatcacggaatcggtctgctttgccgaggataag 8435
Query: 820 catcgcaagaagtcttctgctatggtctgcatctcctgtgggcagcggasaggtagtgag 879
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8436 catcgcaagaagtcttctgctatggtctgcatctcctgtgggcagcggagcagtagtgag 8495
Query: 880 a 880
|
Sbjct: 8496 a 8496
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7002
Number of Sequences: 1807
Number of extensions: 7002
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)